Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim13Q9CYB0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.81■□□□□ 0.28
Trim13Q9CYB0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim13Q9CYB0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim13Q9CYB0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim13Q9CYB0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Gm43137-201ENSMUST00000198052 594 ntBASIC16.78■□□□□ 0.28
Trim13Q9CYB0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim13Q9CYB0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim13Q9CYB0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms