Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ddx47Q9CWX9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Ddx47Q9CWX9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Tgds-204ENSMUST00000228543 1594 ntBASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ddx47Q9CWX9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Golgb1-201ENSMUST00000023534 498 ntBASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.69■□□□□ 0.58
Ddx47Q9CWX9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ddx47Q9CWX9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ddx47Q9CWX9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ddx47Q9CWX9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ddx47Q9CWX9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms