Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Khdc3Q9CWU5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Khdc3Q9CWU5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Khdc3Q9CWU5 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Khdc3Q9CWU5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Khdc3Q9CWU5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.4■□□□□ 0.38
Khdc3Q9CWU5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Khdc3Q9CWU5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Khdc3Q9CWU5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Khdc3Q9CWU5 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Khdc3Q9CWU5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms