Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Gm10167-201ENSMUST00000150411 1479 ntBASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sec61bQ9CQS8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gm45640-201ENSMUST00000210665 1896 ntBASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gm715-201ENSMUST00000117865 831 ntBASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 AC153881.1-201ENSMUST00000214448 284 ntBASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gm15823-201ENSMUST00000064305 670 ntBASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sec61bQ9CQS8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Mir1199-201ENSMUST00000117015 119 ntBASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 AC073947.1-201ENSMUST00000216991 649 ntBASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sec61bQ9CQS8 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Gm11927-201ENSMUST00000118472 759 ntBASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Sec61bQ9CQS8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms