Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trim16Q99PP9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim16Q99PP9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim16Q99PP9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.74■□□□□ 0.43
Trim16Q99PP9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trim16Q99PP9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim16Q99PP9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Gm7291-201ENSMUST00000199147 382 ntBASIC17.73■□□□□ 0.43
Trim16Q99PP9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim16Q99PP9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim16Q99PP9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.72■□□□□ 0.43
Trim16Q99PP9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim16Q99PP9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.71■□□□□ 0.43
Trim16Q99PP9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim16Q99PP9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms