Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim34aQ99PP6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim34aQ99PP6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.49■■□□□ 1.19
Trim34aQ99PP6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim34aQ99PP6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim34aQ99PP6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim34aQ99PP6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim34aQ99PP6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim34aQ99PP6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim34aQ99PP6 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim34aQ99PP6 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC22.47■■□□□ 1.19
Trim34aQ99PP6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim34aQ99PP6 AC166341.7-201ENSMUST00000221698 126 ntBASIC22.47■■□□□ 1.19
Trim34aQ99PP6 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Trim34aQ99PP6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim34aQ99PP6 Gm8668-201ENSMUST00000120559 1447 ntBASIC22.47■■□□□ 1.19
Trim34aQ99PP6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim34aQ99PP6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim34aQ99PP6 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC22.46■■□□□ 1.19
Trim34aQ99PP6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim34aQ99PP6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Trim34aQ99PP6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trim34aQ99PP6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim34aQ99PP6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Trim34aQ99PP6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim34aQ99PP6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
Trim34aQ99PP6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trim34aQ99PP6 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim34aQ99PP6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Gm3375-201ENSMUST00000203929 796 ntBASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim34aQ99PP6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim34aQ99PP6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Gm11539-201ENSMUST00000119837 557 ntBASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Gm13436-201ENSMUST00000120418 567 ntBASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Gm13559-201ENSMUST00000120476 863 ntBASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim34aQ99PP6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Trim34aQ99PP6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms