Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Gm11927-201ENSMUST00000118472 759 ntBASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col25a1Q99MQ5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col25a1Q99MQ5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col25a1Q99MQ5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.83■□□□□ 0.6
Col25a1Q99MQ5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col25a1Q99MQ5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.83■□□□□ 0.6
Col25a1Q99MQ5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col25a1Q99MQ5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col25a1Q99MQ5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col25a1Q99MQ5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col25a1Q99MQ5 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col25a1Q99MQ5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col25a1Q99MQ5 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Gm5186-201ENSMUST00000218781 920 ntBASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col25a1Q99MQ5 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Gm18115-201ENSMUST00000221209 621 ntBASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col25a1Q99MQ5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms