Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcc1Q99LI2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcc1Q99LI2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Clcc1Q99LI2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Clcc1Q99LI2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Mir7071-201ENSMUST00000184847 69 ntBASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Clcc1Q99LI2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Clcc1Q99LI2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Clcc1Q99LI2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Clcc1Q99LI2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Gm10698-201ENSMUST00000182663 604 ntBASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Gm18666-201ENSMUST00000190039 958 ntBASIC17.95■□□□□ 0.46
Clcc1Q99LI2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clcc1Q99LI2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clcc1Q99LI2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.93■□□□□ 0.46
Clcc1Q99LI2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.93■□□□□ 0.46
Clcc1Q99LI2 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clcc1Q99LI2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms