Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab28Q99KL7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab28Q99KL7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Rab28Q99KL7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab28Q99KL7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab28Q99KL7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab28Q99KL7 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab28Q99KL7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rab28Q99KL7 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.58■□□□□ 0.41
Rab28Q99KL7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab28Q99KL7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Rab28Q99KL7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab28Q99KL7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Gm37856-201ENSMUST00000191634 999 ntBASIC17.58■□□□□ 0.4
Rab28Q99KL7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab28Q99KL7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab28Q99KL7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.57■□□□□ 0.4
Rab28Q99KL7 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.57■□□□□ 0.4
Rab28Q99KL7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.57■□□□□ 0.4
Rab28Q99KL7 Zfp783-201ENSMUST00000095946 670 ntBASIC17.57■□□□□ 0.4
Rab28Q99KL7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab28Q99KL7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.56■□□□□ 0.4
Rab28Q99KL7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.56■□□□□ 0.4
Rab28Q99KL7 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rab28Q99KL7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Trmt13-210ENSMUST00000198454 880 ntBASIC17.56■□□□□ 0.4
Rab28Q99KL7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab28Q99KL7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rab28Q99KL7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Gm11927-201ENSMUST00000118472 759 ntBASIC17.55■□□□□ 0.4
Rab28Q99KL7 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Gm20760-201ENSMUST00000179197 648 ntBASIC17.55■□□□□ 0.4
Rab28Q99KL7 Gm38285-201ENSMUST00000192928 922 ntBASIC17.55■□□□□ 0.4
Rab28Q99KL7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.55■□□□□ 0.4
Rab28Q99KL7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.55■□□□□ 0.4
Rab28Q99KL7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Gm11249-201ENSMUST00000117071 859 ntBASIC17.54■□□□□ 0.4
Rab28Q99KL7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Gm27011-201ENSMUST00000182352 972 ntBASIC17.54■□□□□ 0.4
Rab28Q99KL7 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.54■□□□□ 0.4
Rab28Q99KL7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rab28Q99KL7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab28Q99KL7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab28Q99KL7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rab28Q99KL7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab28Q99KL7 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rab28Q99KL7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms