Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Smarcd2Q99JR8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Smarcd2Q99JR8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Smarcd2Q99JR8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Smarcd2Q99JR8 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Gm7889-201ENSMUST00000185591 958 ntBASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.41■□□□□ 0.54
Smarcd2Q99JR8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Smarcd2Q99JR8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Smarcd2Q99JR8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Smarcd2Q99JR8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.38■□□□□ 0.53
Smarcd2Q99JR8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Smarcd2Q99JR8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd2Q99JR8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.38■□□□□ 0.53
Smarcd2Q99JR8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd2Q99JR8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Smarcd2Q99JR8 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.37■□□□□ 0.53
Smarcd2Q99JR8 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms