Protein–RNA interactions for Protein: Q91YK2

Rrp1b, Ribosomal RNA processing protein 1 homolog B, mousemouse

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1bQ91YK2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rrp1bQ91YK2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rrp1bQ91YK2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrp1bQ91YK2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Rrp1bQ91YK2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rrp1bQ91YK2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.27■□□□□ 0.67
Rrp1bQ91YK2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rrp1bQ91YK2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1bQ91YK2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1bQ91YK2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Rrp1bQ91YK2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1bQ91YK2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1bQ91YK2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.26■□□□□ 0.67
Rrp1bQ91YK2 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.26■□□□□ 0.67
Rrp1bQ91YK2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrp1bQ91YK2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrp1bQ91YK2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rrp1bQ91YK2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Gm27801-201ENSMUST00000184174 223 ntBASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrp1bQ91YK2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrp1bQ91YK2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms