Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga9Q91XX9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pcdhga9Q91XX9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Pcdhga9Q91XX9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.01■□□□□ 0.47
Pcdhga9Q91XX9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Gm20049-201ENSMUST00000219950 730 ntBASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Pcdhga9Q91XX9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pcdhga9Q91XX9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Pcdhga9Q91XX9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pcdhga9Q91XX9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pcdhga9Q91XX9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdhga9Q91XX9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms