Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Pcdhgb1Q91XX8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhgb1Q91XX8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb1Q91XX8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Gm11927-201ENSMUST00000118472 759 ntBASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Pcdhgb1Q91XX8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb1Q91XX8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Gm22325-201ENSMUST00000158904 308 ntBASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Gm10698-201ENSMUST00000182663 604 ntBASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Flg-201ENSMUST00000050758 1488 ntBASIC18.84■□□□□ 0.61
Pcdhgb1Q91XX8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb1Q91XX8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb1Q91XX8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Gm18666-201ENSMUST00000190039 958 ntBASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Mtag2-201ENSMUST00000058665 714 ntBASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb1Q91XX8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms