Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhgc3Q91XX1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhgc3Q91XX1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhgc3Q91XX1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Gm12821-201ENSMUST00000120022 600 ntBASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.14■□□□□ 0.33
Pcdhgc3Q91XX1 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhgc3Q91XX1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Gm7860-201ENSMUST00000121190 879 ntBASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhgc3Q91XX1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhgc3Q91XX1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms