Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lims2Q91XD2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.67■□□□□ 0.58
Lims2Q91XD2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.67■□□□□ 0.58
Lims2Q91XD2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lims2Q91XD2 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lims2Q91XD2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lims2Q91XD2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Lims2Q91XD2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lims2Q91XD2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lims2Q91XD2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lims2Q91XD2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.66■□□□□ 0.58
Lims2Q91XD2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Gm15378-201ENSMUST00000121894 207 ntBASIC18.65■□□□□ 0.58
Lims2Q91XD2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lims2Q91XD2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lims2Q91XD2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lims2Q91XD2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lims2Q91XD2 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.64■□□□□ 0.57
Lims2Q91XD2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lims2Q91XD2 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.64■□□□□ 0.57
Lims2Q91XD2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.64■□□□□ 0.57
Lims2Q91XD2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.64■□□□□ 0.57
Lims2Q91XD2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lims2Q91XD2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.64■□□□□ 0.57
Lims2Q91XD2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lims2Q91XD2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lims2Q91XD2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Gm18025-201ENSMUST00000221733 862 ntBASIC18.62■□□□□ 0.57
Lims2Q91XD2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lims2Q91XD2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.61■□□□□ 0.57
Lims2Q91XD2 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lims2Q91XD2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lims2Q91XD2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.61■□□□□ 0.57
Lims2Q91XD2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lims2Q91XD2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
Lims2Q91XD2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms