Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb17Q91VD8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb17Q91VD8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb17Q91VD8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb17Q91VD8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb17Q91VD8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb17Q91VD8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb17Q91VD8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb17Q91VD8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb17Q91VD8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb17Q91VD8 Gm12527-201ENSMUST00000117967 564 ntBASIC18.83■□□□□ 0.6
Pcdhb17Q91VD8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Pcdhb17Q91VD8 AC154634.3-201ENSMUST00000224589 736 ntBASIC18.83■□□□□ 0.6
Pcdhb17Q91VD8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb17Q91VD8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pcdhb17Q91VD8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb17Q91VD8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Dio3-201ENSMUST00000097228 1449 ntBASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pcdhb17Q91VD8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Gm2559-201ENSMUST00000201323 363 ntBASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb17Q91VD8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb17Q91VD8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb17Q91VD8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb17Q91VD8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb17Q91VD8 Flg-201ENSMUST00000050758 1488 ntBASIC18.77■□□□□ 0.6
Pcdhb17Q91VD8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb17Q91VD8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb17Q91VD8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb17Q91VD8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb17Q91VD8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb17Q91VD8 Gm12896-201ENSMUST00000118430 226 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms