Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Mir2861-201ENSMUST00000175539 82 ntBASIC19.36■□□□□ 0.69
TraipQ8VIG6 Gm37055-201ENSMUST00000191866 133 ntBASIC19.36■□□□□ 0.69
TraipQ8VIG6 Gm21814-202ENSMUST00000203277 873 ntBASIC19.36■□□□□ 0.69
TraipQ8VIG6 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.36■□□□□ 0.69
TraipQ8VIG6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.36■□□□□ 0.69
TraipQ8VIG6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.36■□□□□ 0.69
TraipQ8VIG6 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TraipQ8VIG6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Gm42545-201ENSMUST00000202755 922 ntBASIC19.35■□□□□ 0.69
TraipQ8VIG6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.35■□□□□ 0.69
TraipQ8VIG6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TraipQ8VIG6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TraipQ8VIG6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TraipQ8VIG6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TraipQ8VIG6 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.33■□□□□ 0.69
TraipQ8VIG6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TraipQ8VIG6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TraipQ8VIG6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TraipQ8VIG6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TraipQ8VIG6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TraipQ8VIG6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TraipQ8VIG6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.33■□□□□ 0.69
TraipQ8VIG6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
TraipQ8VIG6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.33■□□□□ 0.68
TraipQ8VIG6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TraipQ8VIG6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TraipQ8VIG6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TraipQ8VIG6 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TraipQ8VIG6 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.33■□□□□ 0.68
TraipQ8VIG6 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TraipQ8VIG6 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TraipQ8VIG6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TraipQ8VIG6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.32■□□□□ 0.68
TraipQ8VIG6 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TraipQ8VIG6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Gm11643-201ENSMUST00000119578 864 ntBASIC19.31■□□□□ 0.68
TraipQ8VIG6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Odf3b-204ENSMUST00000227834 930 ntBASIC19.31■□□□□ 0.68
TraipQ8VIG6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.31■□□□□ 0.68
TraipQ8VIG6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TraipQ8VIG6 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms