Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Gm27704-201ENSMUST00000185094 107 ntBASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cspg4Q8VHY0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cspg4Q8VHY0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Gm18669-201ENSMUST00000216049 778 ntBASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cspg4Q8VHY0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cspg4Q8VHY0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cspg4Q8VHY0 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.6■□□□□ 0.09
Cspg4Q8VHY0 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms