Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Gm9847-201ENSMUST00000052528 599 ntBASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Rab40cQ8VHQ4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Spcs1-204ENSMUST00000226782 949 ntBASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rab40cQ8VHQ4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rab40cQ8VHQ4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rab40cQ8VHQ4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Rab40cQ8VHQ4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Rab40cQ8VHQ4 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.83□□□□□ -0.03
Rab40cQ8VHQ4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Rab40cQ8VHQ4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rab40cQ8VHQ4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rab40cQ8VHQ4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rab40cQ8VHQ4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms