Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Dnajc28Q8VCE1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnajc28Q8VCE1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnajc28Q8VCE1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Dnajc28Q8VCE1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Dnajc28Q8VCE1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Dnajc28Q8VCE1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Dnajc28Q8VCE1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Gm715-201ENSMUST00000117865 831 ntBASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Gm15378-201ENSMUST00000121894 207 ntBASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Dnajc28Q8VCE1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Dnajc28Q8VCE1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Dnajc28Q8VCE1 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Dnajc28Q8VCE1 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Gm13158-201ENSMUST00000122007 736 ntBASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Dnajc28Q8VCE1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Dnajc28Q8VCE1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Dnajc28Q8VCE1 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms