Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Rpap2Q8VC34 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Rpap2Q8VC34 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Rpap2Q8VC34 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Gm2399-201ENSMUST00000104944 225 ntBASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rpap2Q8VC34 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rpap2Q8VC34 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap2Q8VC34 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap2Q8VC34 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.94■□□□□ 0.78
Rpap2Q8VC34 Gm4968-201ENSMUST00000071458 858 ntBASIC19.94■□□□□ 0.78
Rpap2Q8VC34 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap2Q8VC34 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.94■□□□□ 0.78
Rpap2Q8VC34 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap2Q8VC34 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap2Q8VC34 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rpap2Q8VC34 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rpap2Q8VC34 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpap2Q8VC34 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpap2Q8VC34 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms