Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccdc9Q8VC31 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.9■■□□□ 1.1
Ccdc9Q8VC31 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ccdc9Q8VC31 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccdc9Q8VC31 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Hivep3-201ENSMUST00000084306 2973 ntBASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccdc9Q8VC31 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccdc9Q8VC31 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Gm5812-201ENSMUST00000061073 957 ntBASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ccdc9Q8VC31 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Gm10399-202ENSMUST00000202768 748 ntBASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ccdc9Q8VC31 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccdc9Q8VC31 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms