Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdt1Q8R4E9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdt1Q8R4E9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cdt1Q8R4E9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.58■□□□□ 0.41
Cdt1Q8R4E9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Rab3c-203ENSMUST00000224180 967 ntBASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cdt1Q8R4E9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Gm26524-201ENSMUST00000192339 390 ntBASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdt1Q8R4E9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdt1Q8R4E9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdt1Q8R4E9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdt1Q8R4E9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdt1Q8R4E9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms