Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Gm38285-201ENSMUST00000192928 922 ntBASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Mtag2-201ENSMUST00000058665 714 ntBASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp40Q8R1F9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Gm8520-201ENSMUST00000186517 868 ntBASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rpp40Q8R1F9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.49■□□□□ 0.71
Rpp40Q8R1F9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Gm5643-201ENSMUST00000117081 966 ntBASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rpp40Q8R1F9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp40Q8R1F9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp40Q8R1F9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp40Q8R1F9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rpp40Q8R1F9 Gm22240-201ENSMUST00000175225 82 ntBASIC19.47■□□□□ 0.71
Rpp40Q8R1F9 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.47■□□□□ 0.71
Rpp40Q8R1F9 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp40Q8R1F9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rpp40Q8R1F9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Gm13158-201ENSMUST00000122007 736 ntBASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rpp40Q8R1F9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rpp40Q8R1F9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpp40Q8R1F9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms