Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Atf7Q8R0S1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Atf7Q8R0S1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf7Q8R0S1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf7Q8R0S1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf7Q8R0S1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf7Q8R0S1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf7Q8R0S1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atf7Q8R0S1 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atf7Q8R0S1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Gm13148-201ENSMUST00000118892 745 ntBASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.47■■□□□ 1.03
Atf7Q8R0S1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atf7Q8R0S1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Gm37179-201ENSMUST00000194862 823 ntBASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atf7Q8R0S1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Atf7Q8R0S1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Atf7Q8R0S1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Atf7Q8R0S1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
Atf7Q8R0S1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Mir5133-201ENSMUST00000174955 77 ntBASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Gm5828-201ENSMUST00000071842 1860 ntBASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Atf7Q8R0S1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
Atf7Q8R0S1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Atf7Q8R0S1 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atf7Q8R0S1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Atf7Q8R0S1 Gm26524-201ENSMUST00000192339 390 ntBASIC21.41■■□□□ 1.02
Atf7Q8R0S1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Atf7Q8R0S1 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms