Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx54Q8K4L0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ddx54Q8K4L0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Gm5587-201ENSMUST00000206270 674 ntBASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Ddx54Q8K4L0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Gm29518-201ENSMUST00000190858 372 ntBASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Ddx54Q8K4L0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx54Q8K4L0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC23.9■■□□□ 1.42
Ddx54Q8K4L0 Gm9694-201ENSMUST00000193347 1189 ntBASIC23.9■■□□□ 1.42
Ddx54Q8K4L0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC23.9■■□□□ 1.42
Ddx54Q8K4L0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx54Q8K4L0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC23.9■■□□□ 1.42
Ddx54Q8K4L0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC23.9■■□□□ 1.42
Ddx54Q8K4L0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Ddx54Q8K4L0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC23.89■■□□□ 1.41
Ddx54Q8K4L0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx54Q8K4L0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx54Q8K4L0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx54Q8K4L0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx54Q8K4L0 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx54Q8K4L0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx54Q8K4L0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Gm16061-201ENSMUST00000122167 857 ntBASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx54Q8K4L0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Gm21559-201ENSMUST00000220638 855 ntBASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Gm8587-201ENSMUST00000076538 843 ntBASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.87■■□□□ 1.41
Ddx54Q8K4L0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx54Q8K4L0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx54Q8K4L0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Ddx54Q8K4L0 Mzt1-203ENSMUST00000227948 952 ntBASIC23.86■■□□□ 1.41
Ddx54Q8K4L0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx54Q8K4L0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx54Q8K4L0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx54Q8K4L0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx54Q8K4L0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx54Q8K4L0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Ddx54Q8K4L0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx54Q8K4L0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC23.85■■□□□ 1.41
Ddx54Q8K4L0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC23.85■■□□□ 1.41
Ddx54Q8K4L0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx54Q8K4L0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Gm27389-201ENSMUST00000183622 195 ntBASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC23.84■■□□□ 1.41
Ddx54Q8K4L0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx54Q8K4L0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms