Protein–RNA interactions for Protein: Q8K021

Scamp1, Secretory carrier-associated membrane protein 1, mousemouse

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp1Q8K021 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Scamp1Q8K021 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Scamp1Q8K021 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Scamp1Q8K021 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Scamp1Q8K021 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.81■□□□□ 0.44
Scamp1Q8K021 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.8■□□□□ 0.44
Scamp1Q8K021 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.8■□□□□ 0.44
Scamp1Q8K021 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.8■□□□□ 0.44
Scamp1Q8K021 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Scamp1Q8K021 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Gm10698-201ENSMUST00000182663 604 ntBASIC17.79■□□□□ 0.44
Scamp1Q8K021 Mir6982-201ENSMUST00000184354 68 ntBASIC17.79■□□□□ 0.44
Scamp1Q8K021 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Scamp1Q8K021 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Gm11927-201ENSMUST00000118472 759 ntBASIC17.78■□□□□ 0.44
Scamp1Q8K021 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.78■□□□□ 0.44
Scamp1Q8K021 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Scamp1Q8K021 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Scamp1Q8K021 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Scamp1Q8K021 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scamp1Q8K021 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Scamp1Q8K021 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.76■□□□□ 0.43
Scamp1Q8K021 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.76■□□□□ 0.43
Scamp1Q8K021 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms