Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Csnka2ipQ8CH19 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Csnka2ipQ8CH19 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Csnka2ipQ8CH19 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Csnka2ipQ8CH19 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Csnka2ipQ8CH19 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Gm11249-201ENSMUST00000117071 859 ntBASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Csnka2ipQ8CH19 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Gm2399-201ENSMUST00000104944 225 ntBASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
Csnka2ipQ8CH19 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.11■□□□□ 0.33
Csnka2ipQ8CH19 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnka2ipQ8CH19 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnka2ipQ8CH19 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Csnka2ipQ8CH19 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.1■□□□□ 0.33
Csnka2ipQ8CH19 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms