Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ShfQ8CG80 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ShfQ8CG80 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ShfQ8CG80 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ShfQ8CG80 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ShfQ8CG80 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShfQ8CG80 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShfQ8CG80 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShfQ8CG80 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.24■□□□□ 0.19
ShfQ8CG80 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShfQ8CG80 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShfQ8CG80 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShfQ8CG80 Gm13234-201ENSMUST00000120010 747 ntBASIC16.24■□□□□ 0.19
ShfQ8CG80 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.24■□□□□ 0.19
ShfQ8CG80 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
ShfQ8CG80 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShfQ8CG80 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ShfQ8CG80 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.24■□□□□ 0.19
ShfQ8CG80 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShfQ8CG80 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShfQ8CG80 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ShfQ8CG80 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShfQ8CG80 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ShfQ8CG80 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
ShfQ8CG80 Gm22325-201ENSMUST00000158904 308 ntBASIC16.23■□□□□ 0.19
ShfQ8CG80 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.23■□□□□ 0.19
ShfQ8CG80 Gm2011-201ENSMUST00000203124 1263 ntBASIC16.23■□□□□ 0.19
ShfQ8CG80 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.23■□□□□ 0.19
ShfQ8CG80 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShfQ8CG80 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShfQ8CG80 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
ShfQ8CG80 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.23■□□□□ 0.19
ShfQ8CG80 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
ShfQ8CG80 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.22■□□□□ 0.19
ShfQ8CG80 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ShfQ8CG80 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ShfQ8CG80 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.22■□□□□ 0.19
ShfQ8CG80 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ShfQ8CG80 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
ShfQ8CG80 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.22■□□□□ 0.19
ShfQ8CG80 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.22■□□□□ 0.19
ShfQ8CG80 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ShfQ8CG80 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
ShfQ8CG80 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShfQ8CG80 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
ShfQ8CG80 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ShfQ8CG80 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ShfQ8CG80 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.21■□□□□ 0.19
ShfQ8CG80 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
ShfQ8CG80 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShfQ8CG80 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ShfQ8CG80 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.2■□□□□ 0.18
ShfQ8CG80 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.2■□□□□ 0.18
ShfQ8CG80 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ShfQ8CG80 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.2■□□□□ 0.18
ShfQ8CG80 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.2■□□□□ 0.18
ShfQ8CG80 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShfQ8CG80 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ShfQ8CG80 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.19■□□□□ 0.18
ShfQ8CG80 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.19■□□□□ 0.18
ShfQ8CG80 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ShfQ8CG80 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ShfQ8CG80 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms