Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc5Q8CG46 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Smc5Q8CG46 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Smc5Q8CG46 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc5Q8CG46 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Smc5Q8CG46 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC22.55■■□□□ 1.2
Smc5Q8CG46 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.55■■□□□ 1.2
Smc5Q8CG46 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Smc5Q8CG46 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Smc5Q8CG46 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Smc5Q8CG46 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.55■■□□□ 1.2
Smc5Q8CG46 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Smc5Q8CG46 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.54■■□□□ 1.2
Smc5Q8CG46 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Smc5Q8CG46 AC160393.1-201ENSMUST00000218378 1279 ntBASIC22.54■■□□□ 1.2
Smc5Q8CG46 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Smc5Q8CG46 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Gm15635-204ENSMUST00000208024 2539 ntBASIC22.53■■□□□ 1.2
Smc5Q8CG46 Gm13234-201ENSMUST00000120010 747 ntBASIC22.53■■□□□ 1.2
Smc5Q8CG46 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Smc5Q8CG46 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc5Q8CG46 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.52■■□□□ 1.2
Smc5Q8CG46 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc5Q8CG46 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Smc5Q8CG46 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Smc5Q8CG46 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc5Q8CG46 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc5Q8CG46 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc5Q8CG46 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Smc5Q8CG46 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Smc5Q8CG46 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC22.52■■□□□ 1.19
Smc5Q8CG46 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc5Q8CG46 Gm37194-201ENSMUST00000193092 3031 ntBASIC22.51■■□□□ 1.19
Smc5Q8CG46 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Smc5Q8CG46 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.51■■□□□ 1.19
Smc5Q8CG46 Gm22325-201ENSMUST00000158904 308 ntBASIC22.51■■□□□ 1.19
Smc5Q8CG46 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc5Q8CG46 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc5Q8CG46 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc5Q8CG46 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc5Q8CG46 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Smc5Q8CG46 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Smc5Q8CG46 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Smc5Q8CG46 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Smc5Q8CG46 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms