Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Gm42642-201ENSMUST00000200683 355 ntBASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc38Q8CDN8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Fst-202ENSMUST00000223640 2612 ntBASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Tgds-204ENSMUST00000228543 1594 ntBASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc38Q8CDN8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Gm18671-201ENSMUST00000214826 683 ntBASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Gm5874-201ENSMUST00000096101 508 ntBASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc38Q8CDN8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Gm5421-201ENSMUST00000181698 2354 ntBASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Gm22325-201ENSMUST00000158904 308 ntBASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc38Q8CDN8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc38Q8CDN8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc38Q8CDN8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.14■□□□□ 0.82
Ccdc38Q8CDN8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc38Q8CDN8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Ccdc38Q8CDN8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc38Q8CDN8 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.14■□□□□ 0.82
Ccdc38Q8CDN8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ccdc38Q8CDN8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccdc38Q8CDN8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms