Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cstf2tQ8C7E9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf2tQ8C7E9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf2tQ8C7E9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf2tQ8C7E9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf2tQ8C7E9 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.58■□□□□ 0.57
Cstf2tQ8C7E9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf2tQ8C7E9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf2tQ8C7E9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cstf2tQ8C7E9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.58■□□□□ 0.56
Cstf2tQ8C7E9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf2tQ8C7E9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf2tQ8C7E9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.58■□□□□ 0.56
Cstf2tQ8C7E9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf2tQ8C7E9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf2tQ8C7E9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cstf2tQ8C7E9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Gm17971-201ENSMUST00000190239 806 ntBASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Gm21814-202ENSMUST00000203277 873 ntBASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cstf2tQ8C7E9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 AA414768-201ENSMUST00000121924 1257 ntBASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Gm44771-201ENSMUST00000206975 626 ntBASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cstf2tQ8C7E9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cstf2tQ8C7E9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Gm14859-201ENSMUST00000117752 357 ntBASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cstf2tQ8C7E9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cstf2tQ8C7E9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cstf2tQ8C7E9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms