Protein–RNA interactions for Protein: Q8C5T8

Ccdc113, Coiled-coil domain-containing protein 113, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc113Q8C5T8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc113Q8C5T8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc113Q8C5T8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc113Q8C5T8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc113Q8C5T8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc113Q8C5T8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc113Q8C5T8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc113Q8C5T8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc113Q8C5T8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc113Q8C5T8 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc113Q8C5T8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Gm2399-201ENSMUST00000104944 225 ntBASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc113Q8C5T8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Ccdc113Q8C5T8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc113Q8C5T8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ccdc113Q8C5T8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 Gm2559-201ENSMUST00000201323 363 ntBASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc113Q8C5T8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms