Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.2■■□□□ 1.3
Ccdc60Q8C4J0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc60Q8C4J0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ccdc60Q8C4J0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc60Q8C4J0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ccdc60Q8C4J0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc60Q8C4J0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ccdc60Q8C4J0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ccdc60Q8C4J0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Fst-202ENSMUST00000223640 2612 ntBASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Fam105a-203ENSMUST00000226170 3043 ntBASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Gm38345-201ENSMUST00000192635 1748 ntBASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ccdc60Q8C4J0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc60Q8C4J0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Gm20049-201ENSMUST00000219950 730 ntBASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc60Q8C4J0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Gm12527-201ENSMUST00000117967 564 ntBASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Gm5953-201ENSMUST00000220644 2616 ntBASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc60Q8C4J0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc60Q8C4J0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc60Q8C4J0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc60Q8C4J0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc60Q8C4J0 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc60Q8C4J0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Ccdc60Q8C4J0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Ccdc60Q8C4J0 Gm12896-201ENSMUST00000118430 226 ntBASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 Gm2559-201ENSMUST00000201323 363 ntBASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ccdc60Q8C4J0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc60Q8C4J0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms