Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rft1Q8C3B8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.21■□□□□ 0.19
Rft1Q8C3B8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.21■□□□□ 0.19
Rft1Q8C3B8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rft1Q8C3B8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rft1Q8C3B8 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rft1Q8C3B8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rft1Q8C3B8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rft1Q8C3B8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rft1Q8C3B8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rft1Q8C3B8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Gm42642-201ENSMUST00000200683 355 ntBASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.18■□□□□ 0.18
Rft1Q8C3B8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rft1Q8C3B8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Gm42778-201ENSMUST00000199644 553 ntBASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Gm9988-201ENSMUST00000069786 435 ntBASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rft1Q8C3B8 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms