Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sh3rf3Q8C120 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sh3rf3Q8C120 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Gm13148-201ENSMUST00000118892 745 ntBASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sh3rf3Q8C120 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sh3rf3Q8C120 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sh3rf3Q8C120 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.89■□□□□ 0.62
Sh3rf3Q8C120 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Gm6211-202ENSMUST00000167849 925 ntBASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sh3rf3Q8C120 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sh3rf3Q8C120 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sh3rf3Q8C120 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3rf3Q8C120 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms