Protein–RNA interactions for Protein: Q8C0C4

Ccser1, Serine-rich coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccser1Q8C0C4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccser1Q8C0C4 Gm38285-201ENSMUST00000192928 922 ntBASIC19.6■□□□□ 0.73
Ccser1Q8C0C4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ccser1Q8C0C4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccser1Q8C0C4 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.6■□□□□ 0.73
Ccser1Q8C0C4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccser1Q8C0C4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccser1Q8C0C4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccser1Q8C0C4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccser1Q8C0C4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Gm13158-201ENSMUST00000122007 736 ntBASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccser1Q8C0C4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccser1Q8C0C4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccser1Q8C0C4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Gm18666-201ENSMUST00000190039 958 ntBASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.55■□□□□ 0.72
Ccser1Q8C0C4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccser1Q8C0C4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Ccser1Q8C0C4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms