Protein–RNA interactions for Protein: Q8BUN5

Smad3, Mothers against decapentaplegic homolog 3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad3Q8BUN5 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.37■□□□□ 0.69
Smad3Q8BUN5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad3Q8BUN5 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad3Q8BUN5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad3Q8BUN5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad3Q8BUN5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smad3Q8BUN5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smad3Q8BUN5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Gm17661-201ENSMUST00000170317 270 ntBASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smad3Q8BUN5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smad3Q8BUN5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.34■□□□□ 0.69
Smad3Q8BUN5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smad3Q8BUN5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.33■□□□□ 0.69
Smad3Q8BUN5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smad3Q8BUN5 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smad3Q8BUN5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smad3Q8BUN5 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Gm22697-201ENSMUST00000175194 63 ntBASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smad3Q8BUN5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smad3Q8BUN5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Gm2274-201ENSMUST00000184539 609 ntBASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smad3Q8BUN5 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smad3Q8BUN5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Smad3Q8BUN5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms