Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cpsf4Q8BQZ5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cpsf4Q8BQZ5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cpsf4Q8BQZ5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.42
Cpsf4Q8BQZ5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cpsf4Q8BQZ5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cpsf4Q8BQZ5 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cpsf4Q8BQZ5 Grk6-206ENSMUST00000224995 2971 ntBASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cpsf4Q8BQZ5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cpsf4Q8BQZ5 Rarb-207ENSMUST00000225921 2756 ntBASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cpsf4Q8BQZ5 Gm12933-201ENSMUST00000120203 872 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms