Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Gm20049-201ENSMUST00000219950 730 ntBASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rab11fip4Q8BQP8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rab11fip4Q8BQP8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rab11fip4Q8BQP8 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip4Q8BQP8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.09■□□□□ 0.81
Rab11fip4Q8BQP8 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.09■□□□□ 0.81
Rab11fip4Q8BQP8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip4Q8BQP8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip4Q8BQP8 Rarb-207ENSMUST00000225921 2756 ntBASIC20.09■□□□□ 0.81
Rab11fip4Q8BQP8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip4Q8BQP8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rab11fip4Q8BQP8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rab11fip4Q8BQP8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip4Q8BQP8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip4Q8BQP8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip4Q8BQP8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip4Q8BQP8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.08■□□□□ 0.8
Rab11fip4Q8BQP8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip4Q8BQP8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.08■□□□□ 0.8
Rab11fip4Q8BQP8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rab11fip4Q8BQP8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rab11fip4Q8BQP8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Gm26524-201ENSMUST00000192339 390 ntBASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Rab3c-203ENSMUST00000224180 967 ntBASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rab11fip4Q8BQP8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip4Q8BQP8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip4Q8BQP8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip4Q8BQP8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip4Q8BQP8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip4Q8BQP8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rab11fip4Q8BQP8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms