Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpne4Q8BLR2 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpne4Q8BLR2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpne4Q8BLR2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpne4Q8BLR2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Gm2559-201ENSMUST00000201323 363 ntBASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cpne4Q8BLR2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Cpne4Q8BLR2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms