Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cdkl3Q8BLF2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cdkl3Q8BLF2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Gm40881-201ENSMUST00000223397 166 ntBASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cdkl3Q8BLF2 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.71■□□□□ 0.1
Cdkl3Q8BLF2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdkl3Q8BLF2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdkl3Q8BLF2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cdkl3Q8BLF2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Cdkl3Q8BLF2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdkl3Q8BLF2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdkl3Q8BLF2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdkl3Q8BLF2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms