Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Srrm4Q8BKA3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Srrm4Q8BKA3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm4Q8BKA3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm4Q8BKA3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm4Q8BKA3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm4Q8BKA3 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.11
Srrm4Q8BKA3 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.77■□□□□ 0.11
Srrm4Q8BKA3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Srrm4Q8BKA3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Gm5408-201ENSMUST00000197998 747 ntBASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Srrm4Q8BKA3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Gm12441-201ENSMUST00000121806 588 ntBASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Gm26524-201ENSMUST00000192339 390 ntBASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Srrm4Q8BKA3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.74■□□□□ 0.11
Srrm4Q8BKA3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Rab3c-203ENSMUST00000224180 967 ntBASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Srrm4Q8BKA3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms