Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf38Q8BI21 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Gm9988-201ENSMUST00000069786 435 ntBASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rnf38Q8BI21 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Rnf38Q8BI21 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf38Q8BI21 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf38Q8BI21 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf38Q8BI21 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Gm13534-201ENSMUST00000121169 513 ntBASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rnf38Q8BI21 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Tgds-204ENSMUST00000228543 1594 ntBASIC17.49■□□□□ 0.39
Rnf38Q8BI21 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf38Q8BI21 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms