Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Clrn3Q8BHH8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Nespas-201ENSMUST00000143738 1083 ntBASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Clrn3Q8BHH8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Gm7290-201ENSMUST00000104990 617 ntBASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Gm12918-201ENSMUST00000120234 636 ntBASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Gm15710-201ENSMUST00000121821 636 ntBASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Gm5075-201ENSMUST00000196916 622 ntBASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Clrn3Q8BHH8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clrn3Q8BHH8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clrn3Q8BHH8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clrn3Q8BHH8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.02■□□□□ 0.31
Clrn3Q8BHH8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Clrn3Q8BHH8 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Clrn3Q8BHH8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Gm9885-202ENSMUST00000186234 2209 ntBASIC17■□□□□ 0.31
Clrn3Q8BHH8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17■□□□□ 0.31
Clrn3Q8BHH8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Dmtn-207ENSMUST00000228001 2437 ntBASIC17■□□□□ 0.31
Clrn3Q8BHH8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Clrn3Q8BHH8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Clrn3Q8BHH8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms