Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4bQ8BGE6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4bQ8BGE6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atg4bQ8BGE6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.13■□□□□ 0.33
Atg4bQ8BGE6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.13■□□□□ 0.33
Atg4bQ8BGE6 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.13■□□□□ 0.33
Atg4bQ8BGE6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.13■□□□□ 0.33
Atg4bQ8BGE6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Atg4bQ8BGE6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Atg4bQ8BGE6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Atg4bQ8BGE6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.1■□□□□ 0.33
Atg4bQ8BGE6 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Fst-202ENSMUST00000223640 2612 ntBASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Gm5408-201ENSMUST00000197998 747 ntBASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Rab3c-203ENSMUST00000224180 967 ntBASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Atg4bQ8BGE6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Atg4bQ8BGE6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4bQ8BGE6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.08■□□□□ 0.32
Atg4bQ8BGE6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4bQ8BGE6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Atg4bQ8BGE6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Atg4bQ8BGE6 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.08■□□□□ 0.32
Atg4bQ8BGE6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4bQ8BGE6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Atg4bQ8BGE6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.07■□□□□ 0.32
Atg4bQ8BGE6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms