Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.19■□□□□ 0.5
Rpp38Q80UU2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Gm5408-201ENSMUST00000197998 747 ntBASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.18■□□□□ 0.5
Rpp38Q80UU2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rpp38Q80UU2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Gm38285-201ENSMUST00000192928 922 ntBASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Grk6-206ENSMUST00000224995 2971 ntBASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rpp38Q80UU2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Fst-202ENSMUST00000223640 2612 ntBASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rpp38Q80UU2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Gm4968-201ENSMUST00000071458 858 ntBASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Zfp783-201ENSMUST00000095946 670 ntBASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.15■□□□□ 0.5
Rpp38Q80UU2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Rpp38Q80UU2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpp38Q80UU2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.14■□□□□ 0.5
Rpp38Q80UU2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rpp38Q80UU2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rpp38Q80UU2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms