Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdp1Q7TSG2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdp1Q7TSG2 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdp1Q7TSG2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdp1Q7TSG2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Ctdp1Q7TSG2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdp1Q7TSG2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdp1Q7TSG2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ctdp1Q7TSG2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.82■□□□□ 0.76
Ctdp1Q7TSG2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ctdp1Q7TSG2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ctdp1Q7TSG2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ctdp1Q7TSG2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ctdp1Q7TSG2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Gm10493-201ENSMUST00000097270 612 ntBASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ctdp1Q7TSG2 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ctdp1Q7TSG2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.77■□□□□ 0.75
Ctdp1Q7TSG2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ctdp1Q7TSG2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms