Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf139Q7TMV1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Gm12441-201ENSMUST00000121806 588 ntBASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.46■□□□□ 0.71
Rnf139Q7TMV1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf139Q7TMV1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Tgds-204ENSMUST00000228543 1594 ntBASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf139Q7TMV1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf139Q7TMV1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf139Q7TMV1 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Gm2559-201ENSMUST00000201323 363 ntBASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf139Q7TMV1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf139Q7TMV1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf139Q7TMV1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.4■□□□□ 0.7
Rnf139Q7TMV1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf139Q7TMV1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf139Q7TMV1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rnf139Q7TMV1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf139Q7TMV1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rnf139Q7TMV1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Rnf139Q7TMV1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms