Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox11Q7M6Y2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox11Q7M6Y2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox11Q7M6Y2 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox11Q7M6Y2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox11Q7M6Y2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sox11Q7M6Y2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Sox11Q7M6Y2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox11Q7M6Y2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sox11Q7M6Y2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sox11Q7M6Y2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sox11Q7M6Y2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sox11Q7M6Y2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms